FunGen-xQTL Resources

Knight ADRC brain splicing QTL

Cohort
Knight-ADRCKnight Alzheimer Disease Research Center
Modality
sQTLQTL results
Tissue or cell type
parietal cortex
Sample size
Not recorded on this page
Release status
Stagednot yet verified
Access
ControlledData use certificate
Lead analysts
Xuanhe ChenSelect a name to email them

Access

Controlled access. Request data access for Knight-ADRC on the AD Knowledge Portal; you need a Synapse account. See How to get the data.

WhereIDAccessWhat you get
Synapsesyn69670592ControlledResults described below

Other Synapse IDs on this page syn69670600 syn69670611 syn69670597 syn69865816 syn69670630

shell
pip install synapseclient
synapse login
synapse get -r syn69670592

Contact

Xuanhe Chen

Path(s) to fine-mapping with SuSiE RSS model

Fine-mapping model objects (SuSiE-RSS, .rds) are available in the finemapping models folder (syn69670592).

Path(s) to TWAS models

Pre-trained TWAS weight models for this context: syn69670600

Quantile TWAS (qTWAS) models: syn69670611

Path(s) to colocalization with SuSiE-coloc / ColocBoost

Multi-context colocalization models (ColocBoost): syn69670597

AD GWAS–xQTL colocalization results: syn69865816

AD GWAS–xQTL colocalization models: syn69670630