FunGen-xQTL Resources

ROSMAP RNA-seq microglia gene expression

Religious Orders Study (ROS) or the Rush Memory and Aging Project (MAP) microglia data-set.

Please refer to this document for an overview of the ROSMAP project.

Cohort
ROSMAPReligious Orders Study and Rush Memory and Aging Project
Data type
ExpressionOmics data
Tissue or cell type
microglia
Sample size
Not recorded on this page
Release status
Stagednot yet verified
Access
ControlledData use certificate
Lead analysts
Travyse EdwardsSelect a name to email them
QTL results
ROSMAP microglia eQTL
Open syn2580853 in Synapse ↗

Access

Controlled access. Request data access for ROSMAP on the AD Knowledge Portal; you need a Synapse account. See How to get the data.

WhereIDAccessWhat you get
Synapsesyn2580853ControlledFiles described below

Other Synapse IDs on this page syn11468526 syn69670592 syn69670597 syn69670600 syn69670611 syn69670630 syn69865816

shell
pip install synapseclient
synapse login
synapse get -r syn2580853

Contact

Travyse Edwards

Data descriptions

The ROSMAP monocyte data were downloaded from syn2580853 on Janunary xx, 2023.

  • Path on CU cluster /..

QTL Analysis

QTL analysis for this dataset is documented in ../../qtl/eQTL/ROSMAP_microglia_expression_qtl.md.

Flagship paper analyses: